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Titlebook: Genomic Imprinting; Methods and Protocol Nora Engel Book 2012 Springer Science+Business Media, LLC 2012 Bioinformatics.Epigenetic profiles.

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Epidemiology and Pathophysiology, based on in vivo recombination, therefore limiting the number of steps performed in ES cells and allowing to take advantage of the growing number of .P insertional mutations already available in transgenic mice.
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Engineering of Large Deletions and Duplications In Vivo based on in vivo recombination, therefore limiting the number of steps performed in ES cells and allowing to take advantage of the growing number of .P insertional mutations already available in transgenic mice.
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Chromatin Immunoprecipitation to Characterize the Epigenetic Profiles of Imprinted Domainssmall number of cells. We provide examples to show that this ChIP protocol can specifically distinguish between parental alleles in mouse embryo fibroblasts carrying maternal and paternal duplication of mouse distal Chr7 and also in normal mouse embryo fibroblasts carrying single nucleotide polymorphism at imprinted regions.
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Isolation of RNA and DNA from Single Preimplantation Embryos and a Small Number of Mammalian Oocytesrary. Following RNA isolation, DNA is precipitated, isolated, and bisulfite converted for DNA methylation studies. Our results demonstrate the feasibility of isolating RNA and DNA from a small number of cells with repeatability of results.
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Generation of Trophoblast Stem Cellss from mouse blastocyst stage embryos. Using this powerful in vitro system, scientists can now begin to tease apart the epigenetic processes that result in placental patterns of imprinted gene expression and begin to better understand the role these genes play in development and disease.
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Immunomagnetic Purification of Murine Primordial Germ Cellsody recognizing an epitope characteristic of pluripotent stem cells. After reaction with a paramagnetic bead-linked secondary antibody, the cell mixture is applied to a strong magnetic field. PGCs are recovered by release from the magnetic field. Purity is assessed by the alkaline phosphatase activity inherent to PGCs.
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Generation of cDNA Libraries from RNP-Derived Regulatory Noncoding RNAsrase, followed by 5′-adapter ligation by T4 RNA ligase and reverse transcription of ncRNAs with an oligo-d(G) anchor primer. Preliminary selection of ncRNAs from ribonucleoprotein particles (RNPs) enables a strong enrichment of the generated libraries with functional regulatory ncRNAs compared to classical approaches.
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