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Titlebook: Comparative Genomics; International Worksh Francesca D. Ciccarelli,István Miklós Conference proceedings 2009 Springer-Verlag Berlin Heidelb

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Madhu B. Anand-Srivastava,Malika Boumati, and find natural values for these parameters. One has to do with the parameter value where the expected information contained in two genomes about each other is maximized. The other has to do with parameter values beyond which all genes are clustered. We analyse these using combinatorial and probabilistic arguments as well as simulations.
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H. H. Ruf,M. Rack,W. Landgraf,F. Hofmannes of these scenarios. Here we give an exact formula for the number of double-cut-and-join (DCJ) rearrangement scenarios of co-tailed genomes. We also construct effective bijections between the set of scenarios that sort a cycle and well studied combinatorial objects such as parking functions and labeled trees.
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Rearrangement Models and Single-Cut Operations,tigate and prove relationships between distances under various existing and new models. We also initiate the formal study of single-cut operations by giving a linear time algorithm for the distance problem under a new single-cut and join model.
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