Titlebook: Comparative Genomics; International Worksh Francesca D. Ciccarelli,István Miklós Conference proceedings 2009 Springer-Verlag Berlin Heidelb

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Inferring the Recent Duplication History of a Gene Cluster,n these genomic regions, making the existing methods difficult to apply. We describe a new method for reconstructing the recent evolutionary history of gene clusters. The method’s performance is evaluated on simulated data and on actual human gene clusters.

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https://doi.org/10.1007/978-3-642-57066-7g only the maximal nested common intervals can be done in linear time. Considering sequences, we provide solutions (modifications of previously defined algorithms and a new algorithm) for different variants of the problem, depending on the treatment one wants to apply to duplicated genes.

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Synthesis and Metabolism of Carbon Monoxideries from genomic sequences in multiple species. Several projects are underway to obtain high quality BAC-based assemblies of duplicated clusters in multiple species, and we anticipate use of our methods in their analysis. Supplementary materials are located at .

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ELUDE

Finding Nested Common Intervals Efficiently,g only the maximal nested common intervals can be done in linear time. Considering sequences, we provide solutions (modifications of previously defined algorithms and a new algorithm) for different variants of the problem, depending on the treatment one wants to apply to duplicated genes.

Resistance

Reconstructing Histories of Complex Gene Clusters on a Phylogeny,ries from genomic sequences in multiple species. Several projects are underway to obtain high quality BAC-based assemblies of duplicated clusters in multiple species, and we anticipate use of our methods in their analysis. Supplementary materials are located at .

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