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Titlebook: Systems Biology; Nikolaus Rajewsky,Stefan Jurga,Jan Barciszewski Book 2018 Springer International Publishing AG, part of Springer Nature 2

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The Interplay of Non-coding RNAs and X Chromosome Inactivation in Human Disease, microRNAs (miRNAs) of around 23 nucleotides and long non-coding RNAs (lncRNAs) that are above 200 nucleotides in length. One of the first functional ncRNAs discovered was the lncRNA named . (.). . is the main actor in a fundamental process called X chromosome inactivation (XCI) where, in females, o
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Biophysical Analysis of miRNA-Dependent Gene Regulation, of the Argonaute family, they form RNA-induced silencing complexes, which bind target mRNAs, reducing their stability and translation rate. A miRNA typically has hundreds of evolutionarily conserved binding sites across the transcriptome, and frequently, a given mRNA carries binding sites for multi
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Modeling and Analyzing the Flow of Molecular Machines in Gene Expression,his process, macromolecules such as ribosomes or RNA polymerases scan the genetic material in a sequential manner. We review several deterministic, continuous-time models for the flow of such macromolecules. These models are both easy to simulate and amenable to rigorous mathematical analysis. We de
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Robust Approaches to Generating Reliable Predictive Models in Systems Biology,a. While doing so, an effective way of representing a network model is developed for computing purposes using adjacency matrix-like data structures. This allows models to include Uni-Uni to Bi-Bi reactions in addition to enzymatic activation and inhibition. It is demonstrated that the technique is e
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