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Titlebook: Research in Computational Molecular Biology; 12th Annual Internat Martin Vingron,Limsoon Wong Conference proceedings 2008 Springer-Verlag B

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Ab Initio Whole Genome Shotgun Assembly with Mated Short Reads,mates the copy counts of repeats in a genome. We also give a second algorithm that combines the predicted copy-counts with mate-pair data in order to assemble the reads into contigs. We run our algorithms on simulated read data from . and predict copy-counts with extremely high accuracy, while assembling long contigs.
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Computational Biology: Its Challenges Past, Present, and Future,inable to these earlier researchers, as well as to anyone only forty years ago. So what are our challenges? Some are clear, including the modeling and analysis of biologys complex systems such as a cells signaling, metabolic and differentiation. Also needed are analysis and models of complex neural
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