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Titlebook: RNA; Methods and Protocol Henrik Nielsen Book 2011 Springer Science+Business Media, LLC 2011 Bioinformatics.Mammalian genome.Messenger RNAs

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Promises and Challenges in Developing RNAi as a Research Tool and Therapyo, and many innovative screens have been reported on the use of RNAi to identify potential drug targets. Despite several technical advances, however, there are still many challenges in determining the ideal design of siRNA sequence, the activation of the immune system, off-target effects, and compet
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The Post-transcriptional Operonroteins and/or small non-coding RNAs so that protein expression is coordinated at the post-transcriptional level. The post-transcriptional operon model (PTO) is used to describe data from an assortment of methods (e.g. RIP-Chip, CLIP-Chip, miRNA profiling, ribosome profiling) that globally address t
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RIP-Chip Analysis: ,NA-Binding Protein ,mmuno,recipitation-Microarray (,) Profilinge expression through combinatorial binding to multiple, physically dispersed cis elements, mRNA binding proteins can regulate the translation of functionally related gene products by coordinately binding to subsets of mRNAs. The networks of mRNA binding proteins that facilitate this fine-tuning of g
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Efficient Poly(A)+ RNA Selection Using LNA Oligo(T) Captureperatures compared to standard oligo(dT) technology. The successful use of the LNA oligo(T) capture method in recovery of mRNA from human cells and the subsequent use of the mRNA in northern blotting analysis, RT-PCR and qRT-PCR are demonstrated.
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The Transcriptional Landscapeependent transcription from within the unit. In genomic regions separating those that encode proteins or highly abundant RNA molecules with known function, transcripts are generally of low abundance and short-lived. In most of these cases, it is unclear to what extent a function is related to transcription . or to the RNA products.
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Web-Based Tools for Studying RNA Structure and Function Here we present a comprehensive list of web based resources that can be used in the study and identification of RNA-based structural and regulatory motifs and provide a survey of the informatic resources that can have been developed to facilitate this research.
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