Titlebook: E‑Cell System; Basic Concepts and A Satya Nanda Vel Arjunan,Pawan K. Dhar,Masaru Tomit Book 2013 Landes Bioscience and Springer Science+Bus

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Distributed Cell Biology Simulations with the E-Cell Systemquire large numbers of repetitive simulation runs with different input parameters. The requirements for significant computational resources imposed by those analytical methods have led to an increasing interest in the use of parallel and distributed computing technologies..We developed a Python-scri

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Simulation of Human Erythrocyte Metabolismechanism to produce ATP. This simplicity makes its metabolism unique from other cells. Due to its simple structure and the traceability of the cell, erythrocyte metabolism and enzymology have been well studied over the last three to four decades. Although vast amounts of erythrocyte component inform

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Dynamic Kinetic Modeling of Mitochondrial Energy Metabolismmetabolic disorders. Here, we performed dynamic kinetic simulations of mitochondrial energy metabolism using the E-Cell Simulation Environment. The simulation model was developed as a reconstruction of publicly available kinetic studies on the enzymes of the respiratory chain, the TCA cycle, fatty a

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