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Titlebook: User-Level Workflow Design; A Bioinformatics Per Anna-Lena Lamprecht Book 2013 Springer-Verlag Berlin Heidelberg 2013 EDAM ontology.bioinfo

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书目名称User-Level Workflow Design
副标题A Bioinformatics Per
编辑Anna-Lena Lamprecht
视频video
概述The application of user-level workflow design makes the approach accessible to users with almost no programming expertise.Describes four realistic application scenarios in bioinformatics.Paves the way
丛书名称Lecture Notes in Computer Science
图书封面Titlebook: User-Level Workflow Design; A Bioinformatics Per Anna-Lena Lamprecht Book 2013 Springer-Verlag Berlin Heidelberg 2013 EDAM ontology.bioinfo
描述The continuous trend in computer science to lift programming to higher abstraction levels increases scalability and opens programming to a wider public. In particular, service-oriented programming and the support of semantics-based frameworks make application development accessible to users with almost no programming expertise. This monograph establishes requirement-centric scientific workflow design as an instance of consequent constraint-driven development. Requirements formulated in terms of user-level constraints are automatically transformed into running applications using temporal logic-based synthesis technology. The impact of this approach is illustrated by applying it to four very different bioinformatics scenarios: phylogenetic analysis, the dedicated GeneFisher-P scenario, the FiatFlux-P scenario, and microarray data analyses.
出版日期Book 2013
关键词EDAM ontology; bioinformatics; constraint-driven design; constraints; domain modeling; formal methods; jAB
版次1
doihttps://doi.org/10.1007/978-3-642-45389-2
isbn_softcover978-3-642-45388-5
isbn_ebook978-3-642-45389-2Series ISSN 0302-9743 Series E-ISSN 1611-3349
issn_series 0302-9743
copyrightSpringer-Verlag Berlin Heidelberg 2013
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https://doi.org/10.1007/978-3-642-45389-2EDAM ontology; bioinformatics; constraint-driven design; constraints; domain modeling; formal methods; jAB
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The Bio-jETI Frameworkf this work. It is based on the jABC framework [306, 229] for model-driven, service-oriented workflow development. Providing comprehensive means for the design, execution and deployment of workflows, already the standard jABC framework covers the common aspects of workflow management.
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Conclusionos, and the evaluation of the approach in itself and in comparison to related work. This chapter concludes by summarizing the work and clarifying achievements and major remaining challenges in Section 9.1, before outlining directives for future work in Section 9.2.
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a micrometre scale. Micro-resonators are at the heart of numerous promising THz sensing and detecting solutions. Experimental studies of individual micrometre-scale THz resonances are essential, yet extremely challenging for the common far-field spectroscopic methods due to extreme sensitivity requi
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