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Titlebook: Comparative Genomics; International Worksh Craig E. Nelson,Stéphane Vialette Conference proceedings 2008 Springer-Verlag Berlin Heidelberg

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发表于 2025-3-21 19:49:20 | 显示全部楼层 |阅读模式
书目名称Comparative Genomics
副标题International Worksh
编辑Craig E. Nelson,Stéphane Vialette
视频videohttp://file.papertrans.cn/231/230913/230913.mp4
丛书名称Lecture Notes in Computer Science
图书封面Titlebook: Comparative Genomics; International Worksh Craig E. Nelson,Stéphane Vialette Conference proceedings 2008 Springer-Verlag Berlin Heidelberg
描述This book constitutes the refereed proceedings of the 6th RECOMB Comparative Genomics Satellite Workshop, RECOMB-CG 2008, held in Paris, France, in October 2008. The 19 revised full papers presented were carefully reviewed and selected from 48 initial submissions. The papers illustrate the crucial role of comparative genomics in understanding genome function and address a broad variety of aspects, ranging from the inference of evolution in genetic regulatory networks to the divergent fates of gene and genome duplication events and to the importance of new computational approaches to unraveling the structural evolution of genomes.
出版日期Conference proceedings 2008
关键词ancestral genomes; computational biology; data mining; dna sequence; evolution; gene tree; genome; genome d
版次1
doihttps://doi.org/10.1007/978-3-540-87989-3
isbn_softcover978-3-540-87988-6
isbn_ebook978-3-540-87989-3Series ISSN 0302-9743 Series E-ISSN 1611-3349
issn_series 0302-9743
copyrightSpringer-Verlag Berlin Heidelberg 2008
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Sozioanalyse in der pädagogischen Arbeite opportunity to identify cases of gene loss, the best method to do this with is unclear. A number of methods to identify gene losses rely on the presence of a pseudogene for each loss. If genes are completely or largely removed from the genome, however, such methods will fail to identify these case
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Sozioanalyse in der pädagogischen Arbeitransposition accounts for at least half of all predicted duplicate genes in these genomes, with tandem and interspersed duplicates comprising the other half. Estimation of the evolutionary rates in each class revealed greater rate asymmetry between retrotransposed and interspersed segmental duplicat
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https://doi.org/10.1007/978-3-662-67136-8ariation. For many years the origin of functional gene duplicates was assumed to be whole or partial genome duplication events, but recently retrotransposition has also been shown to contribute new functional protein coding genes and siRNA’s. Here we present a method for the identification and class
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https://doi.org/10.1007/978-3-662-67136-8n about the functional interdependencies between sets of genes and cellular functions, about their complementary and backup relations, and more generally, for answering fundamental questions about the evolution of biological systems..Orthologs that exhibit strong signal of co-evolution in part of th
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https://doi.org/10.1007/978-3-642-34541-8consider parsimony analysis over numerical characters, where knowing the feature values at terminal taxa allows one to infer ancestral features, namely, by minimizing the total number of changes on the edges using continuous-valued distance measures. In particular, we show that ancestral reconstruct
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https://doi.org/10.1007/978-3-642-34541-8airwise distance measure, .., for genomes separated by less than approximately 0.5 mismatches/nucleotide. We have implemented the computation of .. based on enhanced suffix arrays in the program ., which is freely available from .. The software is applied to genomes obtained from three sets of taxa:
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Programmbeschreibung und Anwendung,d using their differences to locate HGT events. Another approach is based on augmenting a species tree into a phylogenetic network to improve the fitness of the evolution of the gene sequence data under an optimization criterion, such as maximum parsimony (MP). One major problem with the first appro
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Christian Reutlinger,Andrea Thoma we found that the existing HPV groups are monophyletic and that the high-risk carcinogenicity taxa are usually clustered together. Then, we present a new algorithm for analyzing the information content of multiple sequence alignments in relation to epidemiologic carcinogenicity data to identify reg
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