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Titlebook: Comparative Genomics; 20th International C Katharina Jahn,Tomáš Vinař Conference proceedings 2023 The Editor(s) (if applicable) and The Aut

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发表于 2025-3-21 17:36:50 | 显示全部楼层 |阅读模式
书目名称Comparative Genomics
副标题20th International C
编辑Katharina Jahn,Tomáš Vinař
视频video
丛书名称Lecture Notes in Computer Science
图书封面Titlebook: Comparative Genomics; 20th International C Katharina Jahn,Tomáš Vinař Conference proceedings 2023 The Editor(s) (if applicable) and The Aut
描述This book constitutes the refereed proceedings of the 20th Annual RECOMB Satellite Workshop on Comparative Genomics, RECOMB-CG 2023 which took place in Istanbul, Turkey, in April 2023. .The 15 full papers included in this book were carefully reviewed and selected from 25 submissions. The papers present cutting edge research in comparative genomics, with an emphasis on computational approaches and novel experimental results..Chapters "Inferring Clusters of Orthologous and Paralogous Transcripts" and "Gene Order Phylogeny via Ancestral Genome Reconstruction under Dollo" are published Open Access under Creative Commons Attribution license (CC BY 4.0). .
出版日期Conference proceedings 2023
关键词artificial intelligence; combinatorial optimization; communication systems; comparative genomics; comput
版次1
doihttps://doi.org/10.1007/978-3-031-36911-7
isbn_softcover978-3-031-36910-0
isbn_ebook978-3-031-36911-7Series ISSN 0302-9743 Series E-ISSN 1611-3349
issn_series 0302-9743
copyrightThe Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerl
The information of publication is updating

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发表于 2025-3-21 21:00:00 | 显示全部楼层
,Inferring Clusters of Orthologous and Paralogous Transcripts,tome diversity. Recent studies suggest that more than 90% of human genes are concerned, and the transcripts resulting from alternative processing are highly conserved between orthologous genes..In this paper, we first present a model to define orthology and paralogy relationships at the transcriptom
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,The Floor Is Lava - Halving Genomes with Viaducts, Piers and Pontoons,J-indel model, capable of handling gains and losses of genetic material, research has shifted in recent years toward enabling it to handle natural genomes, for which no assumption about the distribution of markers has to be made..Whole Genome Duplications (WGD) are events that double the content and
发表于 2025-3-22 12:20:18 | 显示全部楼层
,Two Strikes Against the Phage Recombination Problem,n of one bacteriophage population into another using the minimum number of recombinations. Here we show that the combinatorial problem is NP-Complete, both when the target population contains only one genome of unbounded length, and when the size of the genomes is bounded by a constant. In the first
发表于 2025-3-22 14:54:44 | 显示全部楼层
Physical Mapping of Two Nested Fixed Inversions in the X Chromosome of the Malaria Mosquito ,erization of inversion breakpoints can be useful for describing mechanisms of rearrangements and identification of genes involved in diversification of species. Mosquito species of the Maculipennis Subgroup include dominant malaria vectors and nonvectors in Eurasia, but breakpoint regions of inversi
发表于 2025-3-22 17:40:33 | 显示全部楼层
,Gene Order Phylogeny via Ancestral Genome Reconstruction Under Dollo,k-ahead inspired by Dollo’s law, while simultaneously reconstructing each ancestor (sometimes referred to as hypothetical taxonomic units “HTU”). We first present a generic version of the algorithm illustrating a necessary consequence of Dollo characters. In a concrete application we use generalized
发表于 2025-3-23 00:59:55 | 显示全部楼层
,Prior Density Learning in Variational Bayesian Phylogenetic Parameters Inference,rence an alternative approach to Markov Chain Monte Carlo methods for approximating the phylogenetic posterior. However, one of the main drawbacks of such approaches is modelling the prior through fixed distributions, which could bias the posterior approximation if they are distant from the current
发表于 2025-3-23 03:13:10 | 显示全部楼层
The Asymmetric Cluster Affinity Cost,ate the robustness of a tree to data perturbations. The Robinson-Foulds distance is a widely used measure for comparing the topologies of two trees, but it is highly sensitive to tree error. Consequently, tree differences may be over-estimated, leading to incorrect inference. An approach to overcome
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,The ,-Robinson Foulds Measures for Labeled Trees, evolution of tumor cells is modeled using labeled trees, researchers are motivated to propose different measures for the comparison of mutation trees and other labeled trees. While the Robinson-Foulds distance is widely used for the comparison of phylogenetic trees, it has weaknesses when it is app
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