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Titlebook: Combinatorial Pattern Matching; 22nd Annual Symposiu Raffaele Giancarlo,Giovanni Manzini Conference proceedings 2011 Springer Berlin Heidel

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书目名称Combinatorial Pattern Matching
副标题22nd Annual Symposiu
编辑Raffaele Giancarlo,Giovanni Manzini
视频videohttp://file.papertrans.cn/231/230010/230010.mp4
概述Fast track conference proceedings.Unique visibility.State of the art research
丛书名称Lecture Notes in Computer Science
图书封面Titlebook: Combinatorial Pattern Matching; 22nd Annual Symposiu Raffaele Giancarlo,Giovanni Manzini Conference proceedings 2011 Springer Berlin Heidel
描述This book constitutes the refereed proceedings of the 22nd Annual Symposium on Combinatorial Pattern Matching, CPM 2011, held in Palermi, Italy, in June 2011. .The 36 revised full papers presented together with 3 invited talks were carefully reviewed and selected from 70 submissions. The papers address issues of searching and matching strings and more complicated patterns such as trees, regular expressions, graphs, point sets, and arrays. The goal is to derive non-trivial combinatorial properties of such structures and to exploit these properties in order to either achieve superior performance for the corresponding computational problems or pinpoint conditions under which searches cannot be performed efficiently. The meeting also deals with problems in computational biology, data compression and data mining, coding, information retrieval, natural language processing and pattern recognition.
出版日期Conference proceedings 2011
关键词approximation algorithms; computational complexity; graph algoithms; graph computation; search algorithm
版次1
doihttps://doi.org/10.1007/978-3-642-21458-5
isbn_softcover978-3-642-21457-8
isbn_ebook978-3-642-21458-5Series ISSN 0302-9743 Series E-ISSN 1611-3349
issn_series 0302-9743
copyrightSpringer Berlin Heidelberg 2011
The information of publication is updating

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Succincter Text Indexing with Wildcardsllions of single nucleotide polymorphisms (SNPs) —positions known to differ between individuals. SNPs modeled as wildcards can lead to more informed and biologically relevant alignments. We improve the space complexity of previous approaches by giving a succinct index requiring (2 + .(1)). log. + .(
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Self-indexing Based on LZ77llections such as sequence databases of genomes of related species, software repositories, versioned document collections, and temporal text databases. Such collections are extremely compressible but classical self-indexes fail to capture that source of compressibility. Our self-index takes in pract
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A ,-Step Approach for Distinct Squares in Stringss both the length . and . − . where . is the size of the alphabet. We conjecture that a string of length . and containing . distinct symbols has no more than . − . distinct squares, show the critical role played by strings satisfying . = 2., and present some properties satisfied by strings of length
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Phylogenetic Footprinting and Consistent Sets of Local Aligmentsetic footprinting, a technique used to identify regulatory elements by comparative sequence analysis. Based on a theoretical discussion of the problem we devise an efficient heuristic and introduce the software tool . for this task. Tests on both biological and random data demonstrated the heuristic
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