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Titlebook: Bioinformatics and Phylogenetics; Seminal Contribution Tandy Warnow Book 2019 Springer Nature Switzerland AG 2019 Bioinformatics.Phylogenet

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Genome Rearrangement Problems with Single and Multiple Gene Copies: A Review,ution. Most problems regarding genomes with multiple gene copies are computationally hard, and practical methods for their analysis are reviewed. As more high-resolution genomes become available, especially in cancer, better models and efficient algorithms will be needed.
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Computational Models for Cancer Phylogenetics,ders to some of the space of approaches in current practice in phylogenetics and help them appreciate how models have developed, and continue to develop, to better capture the peculiar nature of evolution in cancers.
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Integer Linear Programming in Computational Biology: Overview of ILP, and New Results for Travelinggue that the correct compact formulation can be very effective for problems of the size and structure that arise in computational biology. These empirical results, and some additional arguments, then bring into question the relevance of the concept of strength of an ILP formulation as a predictor of the speed that it will be solved.
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Clusters, Trees, and Phylogenetic Network Classes,cs and hybridization networks in plant science. In this expository chapter, we introduce recent developments in characterizing the classes of rooted phylogenetic networks (including tree-based, reticulation-visible, galled networks, etc.) and designing fast algorithms for the cluster and tree containment problems for rooted phylogenetic networks.
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Book 2019M.E. Moret in this field. Reflecting the wide-ranging influences of Prof. Moret’s research, the coverage encompasses such areas as phylogenetic tree and network estimation, genome rearrangements, cancer phylogeny, species trees, divide-and-conquer strategies, and integer linear programming. Each sel
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https://doi.org/10.1007/978-3-663-08626-0cs and hybridization networks in plant science. In this expository chapter, we introduce recent developments in characterizing the classes of rooted phylogenetic networks (including tree-based, reticulation-visible, galled networks, etc.) and designing fast algorithms for the cluster and tree containment problems for rooted phylogenetic networks.
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