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Titlebook: Bioinformatics and Computational Biology Solutions Using R and Bioconductor; Robert Gentleman,Vincent J. Carey,Sandrine Dudoit Book 2005 S

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Book 2005ut experimentation in genomics and molecular biology. Bioconductor is rooted in the open source statistical computing environment R...This volume‘s coverage is broad and ranges across most of the key capabilities of the Bioconductor project, including importation and preprocessing of high-throughput
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Versuchswerkstoffe und Probenherstellung, Web services as the basic computational resource for bioinformatics. Well-designed Web services will play an essential role in solving many bioinformatic problems and R has the capability of playing many different roles, both on the client and the server side.
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Theorie der prismatischen Kerbwirkung,est to the Acute Lymphoblastic Leukemia (ALL) data set of Chiaretti et al. (2004), with the aim of identifying genes whose expression measures are associated with (possibly censored) biological and clinical outcomes.
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Preprocessing Two-Color Spotted Arraysoratory tools such as MAplots, spatial plots, and boxplots to assess data quality of an array. Finally, algorithms available for performing appropriate normalization to remove sources of systematic variation are discussed. We will illustrate the above-mentioned functions using a case study.
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Querying On-line Resources Web services as the basic computational resource for bioinformatics. Well-designed Web services will play an essential role in solving many bioinformatic problems and R has the capability of playing many different roles, both on the client and the server side.
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Multiple Testing Procedures: the multtest Package and Applications to Genomicsest to the Acute Lymphoblastic Leukemia (ALL) data set of Chiaretti et al. (2004), with the aim of identifying genes whose expression measures are associated with (possibly censored) biological and clinical outcomes.
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