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Titlebook: Bioinformatics and Biomedical Engineering; 5th International Wo Ignacio Rojas,Francisco Ortuño Conference proceedings 2017 Springer Interna

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https://doi.org/10.1007/978-3-642-41710-8ics. However, in order to fully exploit the potential of the information contained within metagenomes, it becomes of interest to remove any intermediate agent that is prone to introduce errors or biased results. In this work, we perform an analysis over the state of the art methods and deduce that i
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https://doi.org/10.1007/3-211-32233-7 exponential time for the best exact sequential algorithm in the worst case. In this paper, we reduce the running time for generating the solution of PDP by designing an efficient parallel algorithm. The algorithm is based on parallelizing the fastest sequential algorithm for PDP. The experimental s
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https://doi.org/10.1007/3-211-32233-7s and regulates a multitude of protein targets affecting different cellular processes. Short linear motifs (SLiMs), on the other hand, have been effectively used as features for analyzing protein-protein interactions, though their properties have not been used in the prediction of CaM-binding protei
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https://doi.org/10.1007/3-211-32233-7 the conversion of coil sequences into β-strands. All homodimers in the Protein Data Bank relying on those chameleon sequences have been identified. Initial analysis based on sequential and structural features has revealed that many of those dimers display specific properties which could contribute
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https://doi.org/10.1007/3-211-32233-7main level in order to relate protein structure to protein function. Thanks to the SIFTS database, many PDB chains are now cross-referenced with Pfam domains and Gene ontology (GO) terms. However, these annotations do not include any explicit relationship between individual Pfam domains and GO terms
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https://doi.org/10.1007/978-3-319-51817-6CRs). In principle, GPCRM builds a GPCR model using a MODELLER-based homology modeling procedure. In addition, that commonly used procedure was improved by using comparison of sequence profiles, multiple template structures and the extensive loop refinement in Rosetta. We applied our method to predi
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