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Titlebook: Bioinformatics Research and Application; 7th International Sy Jianer Chen,Jianxin Wang,Alexander Zelikovsky Conference proceedings 2011 Spr

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High-Performance Blob-Based Iterative Reconstruction of Electron Tomography on Multi-GPUs,structure only needs nearly 1/16 of the storage space in comparison with ELLPACK-R (ELLR) data structure and yields significant acceleration. Experimental results indicate that the multilevel parallel scheme allows efficient implementations of 3D reconstruction of ET on multi-GPUs, without loss any resolution.
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Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among Extant Genomes,ameters. The first problem, based on the conflation of the pairwise syntenies, is the inference of disjoint sets of orthologous genes, at most one copy for each genome, and the second problem is the inference of the gene order at all ancestors simultaneously, minimizing the total number of genomic rearrangements over a given phylogeny.
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https://doi.org/10.1007/978-3-319-70736-5al patterns through genomewide integration of multiple sources of data and across multiple species; and last but not least, one needs to develop new bioinformatic software and databases in order to handle the data effectively.
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https://doi.org/10.1007/978-3-319-70736-5esponding to structural similarity of the examined RNA structures. Our algorithm yields not only the distance but also a superposition allowing to visualize the structural similarity. Comparative experiments show that our proposed method is competitive with the best existing solutions, both in terms of effectiveness and efficiency.
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M. Boiti,F. Pempinelli,A. Pogrebkovrom five prototypes and applied the proposed method to microarray gene expression data of rat liver cells treated with corticosteroid. We found that some extended simulation models have higher prediction power for some genes than the original models.
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