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Titlebook: Bioinformatics; Volume II: Structure Jonathan M. Keith Book 2017Latest edition Springer Science+Business Media New York 2017 genotype.pheno

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楼主: 武士精神
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Analysis of Genome-Wide Association Dataved population structure, is a major cause of false-positive genetic associations, there is a particular focus on the crucial steps required to prepare the SNP data prior to analysis. This is followed by the methods used to perform the actual GWAS and visualization of the results.
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Studying Antibody Repertoires with Next-Generation Sequencinggn..We outline the main contexts in which antibody repertoire analysis has been used, and summarize the key tools that are available. The humoral immune response to vaccination has been a particular focus of repertoire analyses, and we review the key conclusions and methods used in these studies.
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https://doi.org/10.1007/978-3-663-15910-0ity is a priori a subjective concept, and difficult to quantify, it must computationally be assessed in a formally consistent manner. Otherwise, there is little utility of similarity calculations. Consistent treatment requires approximations to be made and the consideration of alternative computational similarity concepts, as discussed herein.
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https://doi.org/10.1007/978-3-663-06752-8ion of the genes within genomes into pairs of adjacent genes. Then, the pairs of adjacent genes in a genome of interest are mapped to their corresponding orthologs in other, informative, genomes. The final step is to verify if the mapped orthologs are also pairs of adjacent genes in the informative genomes.
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https://doi.org/10.1007/978-3-663-15911-7studies. This chapter reviews the major methods available to researchers to adjust for the biases introduced by relatedness and maximize power to detect associations. The advantages and disadvantages of different methods are presented with reference to elements of study design, population characteristics, and computational requirements.
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