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Titlebook: Animal Endo-SiRNAs; Methods and Protocol Andreas Werner Book 2014 Springer Science+Business Media New York 2014 C. elegans.Dicer molecule.S

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Assays for Direct and Indirect Effects of , Endo-siRNAs,) have emerged in the last few years as a largely independent class of small RNAs that regulate endogenous gene expression, with mechanisms distinct from those of piRNAs and miRNAs. Quantification of these small RNAs and their effect on target RNAs is a powerful tool for the analysis of RNAi; howeve
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Computing siRNA and piRNA Overlap Signatures,nate. A bioinformatic approach revealed a strong tendency of sense and antisense piRNAs to overlap with each other over ten nucleotides and had a major role in understanding the mechanisms of piRNA biogenesis. Using similar approaches, it is possible to detect a tendency of sense and antisense siRNA
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Computational Analysis, Biochemical Purification, and Detection of tRNA-Derived Small RNA Fragmentscs tools for their detection. Small RNAs generated from tRNAs, transfer RNA-derived fragments (tRFs), represent a novel challenge in accurately identifying and distinguishing them from random degradation products of tRNAs. Here, we describe a bioinformatics approach to detect tRFs in next-generation
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