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Titlebook: Algorithms in Bioinformatics; 16th International W Martin‘Frith,Christian Nørgaard Storm Pedersen Conference proceedings 2016 Springer Inte

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期刊全称Algorithms in Bioinformatics
期刊简称16th International W
影响因子2023Martin‘Frith,Christian Nørgaard Storm Pedersen
视频video
发行地址Includes supplementary material:
学科分类Lecture Notes in Computer Science
图书封面Titlebook: Algorithms in Bioinformatics; 16th International W Martin‘Frith,Christian Nørgaard Storm Pedersen Conference proceedings 2016 Springer Inte
影响因子This book constitutes the refereed proceedings of the 16th InternationalWorkshop on Algorithms in Bioinformatics, WABI 2016, held in Aarhus, Denmark. The 25 full papers  together with 2 invited talks presented were carefullyreviewed and selected from 54 submissions..The selected papers cover a wide range of topics from networks, to.phylogenetic studies, sequence and genome analysis, comparative genomics, and mass spectrometry data analysis. .
Pindex Conference proceedings 2016
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A Biclique Approach to Reference Anchored Gene Blocks and Its Applications to Pathogenicity IslandsNA element, a window size bound . on the length of a substring of interest in ., and a set of target gene sequences .. Our objective is to identify gene-blocks in . that are centered in a subset . of co-localized genes from ., and contain genomes from . in which the corresponding orthologs of the ge
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An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks in Cancer,dentify the handful of driver mutations responsible for cancer among the hundreds or thousands mutations present in a tumour genome. Recent approaches have shown that analyzing mutations in the context of interaction networks increases the power to identify driver mutations..In this work we propose
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SpecTrees: An Efficient Without a Priori Data Structure for MS/MS Spectra Identification,S spectra per sample, each one having to be compared to a large reference database from which artificial spectra are produced. The goal is to map each experimental spectrum to an artificial one, so as to identify the proteins they come from. However, this comparison step is highly time consuming. Th
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Predicting Core Columns of Protein Multiple Sequence Alignments for Improved Parameter Advising,ld-standard reference alignment of its proteins. In benchmark suites of protein reference alignments, the core columns of the reference are those that can be confidently labeled as correct, usually due to all residues in the column being sufficiently close in the spatial superposition of the folded
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Fast Compatibility Testing for Phylogenies with Nested Taxa,root node is labeled Rodentia, which itself could nest within a subtree whose root is labeled Mammalia. Suppose we are given collection . of semi-labeled trees over various subsets of a set of taxa. The ancestral compatibility problem asks whether there is a semi-labeled tree . that respects the clu
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