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Titlebook: Algorithms for Computational Biology; 8th International Co Carlos Martín-Vide,Miguel A. Vega-Rodríguez,Travis Conference proceedings 2021 S

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978-3-030-74431-1Springer Nature Switzerland AG 2021
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Lecture Notes in Computer Sciencehttp://image.papertrans.cn/a/image/153206.jpg
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Can We Replace Reads by Numeric Signatures? Lyndon Fingerprints as Representations of Sequencing Reaon has been proved to preserve common factors in overlapping reads [.], thus leading to the idea of using factorizations of sequences to define measures of similarity between reads. In this paper we propose as a signature of sequencing reads the notion of ., i.e., the sequence of lengths of consecut
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Novel Phylogenetic Network Distances Based on Cherry Pickingpoints are parents of leaves. Cherry-picking operations were recently shown to have several structural and algorithmic applications in the study of networks, for instance in determining their reconstructibility or in solving the network hybridization and network containment problems. In particular,
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Best Match Graphs with Binary Treesde a near-cubic algorithm to determine whether a BMG can be explained by a fully resolved gene tree and, if so, to construct such a tree. Moreover, we show that all such binary trees are refinements of the unique binary-resolvable tree (BRT), which in general is a substantial refinement of the also
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