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Titlebook: Algorithms for Computational Biology; 8th International Co Carlos Martín-Vide,Miguel A. Vega-Rodríguez,Travis Conference proceedings 2021 S

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发表于 2025-3-21 17:29:48 | 显示全部楼层 |阅读模式
期刊全称Algorithms for Computational Biology
期刊简称8th International Co
影响因子2023Carlos Martín-Vide,Miguel A. Vega-Rodríguez,Travis
视频video
学科分类Lecture Notes in Computer Science
图书封面Titlebook: Algorithms for Computational Biology; 8th International Co Carlos Martín-Vide,Miguel A. Vega-Rodríguez,Travis Conference proceedings 2021 S
影响因子.This book constitutes the proceedings of the 8th International Conference on Algorithms for Computational Biology, AlCoB 2020, was planned to be held in Missoula, MT, USA in June 2021. Due to the Covid-19 pandemic, AlCoB 2020 and AlCoB 2021 were merged and held on these dates together. AlCoB 2020 proceedings were published as LNBI 12099..The 12 full papers included in this volume were carefully reviewed and selected from 22 submissions. They were organized in topical sections on genomics, phylogenetics, and RNA-Seq and other biological processes...The scope of AlCoB includes topics of either theoretical or applied interest, namely: sequence analysis; sequence alignment; sequence assembly; genome rearrangement; regulatory motif finding; phylogeny reconstruction; phylogeny comparison; structure prediction; compressive genomics; proteomics: molecular pathways, interaction networks, mass spectrometry analysis; transcriptomics: splicing variants, isoform inference and quantification, differential analysis; next-generation sequencing: population genomics, metagenomics, metatranscriptomics, epigenomics; genome CD architecture; microbiome analysis; cancer computational biology; and system
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发表于 2025-3-21 20:40:34 | 显示全部楼层
https://doi.org/10.1007/978-3-642-94998-2ikelihood recovery algorithm under the probabilistic framework. Our findings highlight the implications of introducing randomness to the infection vectors – we find that the combinatorial structure of the pooling designs plays a less important role than the parameters such as pool size and redundanc
发表于 2025-3-22 03:49:45 | 显示全部楼层
https://doi.org/10.1007/978-3-642-86168-0ual despite their different formulations. We also show that computing these three equivalent distances is NP-hard, even when restricted to comparing a tree and a network. On the positive side, we show that they can be computed in quadratic time on two trees, providing a new comparative measure for p
发表于 2025-3-22 07:17:57 | 显示全部楼层
,Gesamtstoffwechsel und Ernährung, region size is a range of acceptable values. We consider the well-known reversals distance and present a 2-approximation algorithm, alongside NP-hardness proof. Our results rely on the Flexible Weighted Cycle Graph, adapted from the breakpoint graph to deal with flexible intergenic regions sizes.
发表于 2025-3-22 12:01:17 | 显示全部楼层
发表于 2025-3-22 12:59:01 | 显示全部楼层
K. Lohmann,P. Ohlmeyer,Z. Starycally designed for MWT-AM. We show that the best of these variants, which we refer to as GCM-MWT, perform well for the MWT-AM criterion. We explore GCM-MWT in comparison to other methods for merging alignments, T-coffee and MAFFT–merge, and find that GCM-MWT produces more accurate merged alignments.
发表于 2025-3-22 17:21:06 | 显示全部楼层
Can We Replace Reads by Numeric Signatures? Lyndon Fingerprints as Representations of Sequencing Reaess of this representation for machine learning algorithms for classifying biological sequences. In particular, we considered the problem of assigning RNA-Seq reads to the most likely gene from which they were generated. Our results show that fingerprints can provide an effective machine learning in
发表于 2025-3-23 01:02:48 | 显示全部楼层
A Recovery Algorithm and Pooling Designs for One-Stage Noisy Group Testing Under the Probabilistic Fikelihood recovery algorithm under the probabilistic framework. Our findings highlight the implications of introducing randomness to the infection vectors – we find that the combinatorial structure of the pooling designs plays a less important role than the parameters such as pool size and redundanc
发表于 2025-3-23 02:31:04 | 显示全部楼层
Novel Phylogenetic Network Distances Based on Cherry Pickingual despite their different formulations. We also show that computing these three equivalent distances is NP-hard, even when restricted to comparing a tree and a network. On the positive side, we show that they can be computed in quadratic time on two trees, providing a new comparative measure for p
发表于 2025-3-23 07:32:37 | 显示全部楼层
Reversals Distance Considering Flexible Intergenic Regions Sizes region size is a range of acceptable values. We consider the well-known reversals distance and present a 2-approximation algorithm, alongside NP-hardness proof. Our results rely on the Flexible Weighted Cycle Graph, adapted from the breakpoint graph to deal with flexible intergenic regions sizes.
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