Titlebook: Algebraic Biology; Second International Hirokazu Anai,Katsuhisa Horimoto,Temur Kutsia Conference proceedings 2007 Springer-Verlag Berlin He

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The Israel Water Economy: An Overviewalgebraist’s somewhat idiosyncratic response to these and other related questions, but also aims to persuade young algebraists to examine the possible role they and algebra can play to enrich this subject.

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Introduction: Why Decentralization Matters?, interaction graph, and relate them to the type, number and cardinality of attractors in the state transition graph. In particular, we derive sufficient conditions for regulatory networks to exhibit multistationarity or oscillatory behavior, thus giving a partial converse to the well-known Thomas conjectures.

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https://doi.org/10.1007/978-3-030-02047-7olve the generated instances and find equilibrium configurations. This method of analyzing reaction networks is generic, flexible and scales to large models of reaction networks. We present a few case studies to validate our claims.

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Modeling Static Biological Compartments with Beta-binders,ulus is equipped with the notion of locality, and various kinds of relations between actions are defined. Moreover, we compare our proposal with similar formalisms and we show how to use the proposed calculus for modeling and analyzing the cAMP-signaling pathway in OSNs.

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Deducing Interactions in Partially Unspecified Biological Systems,operties that unspecified components must satisfy to interact within the system. These can be computationally inferred, extending the effectiveness of the in silico experiments. The use of the approach is illustrated by means of case studies.