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Titlebook: Advances in Bioinformatics and Computational Biology; 8th Brazilian Sympos João C. Setubal,Nalvo F. Almeida Conference proceedings 2013 Spr

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0302-9743 ilian Symposium on Bioinformatics, BSB 2013, held in Recife, Brazil, in November 2013. The 18 regular papers presented were carefully reviewed and selected for inclusion in this book. The papers cover all aspects of bioinformatics and computational biology.978-3-319-02623-7978-3-319-02624-4Series ISSN 0302-9743 Series E-ISSN 1611-3349
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Advances in Bioinformatics and Computational Biology978-3-319-02624-4Series ISSN 0302-9743 Series E-ISSN 1611-3349
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https://doi.org/10.1007/978-3-642-02147-3cal distribution of base pair spans in large collection of experimentally known RNA structures. Surprisingly, we find that long-range base pairs are overrepresented in these data. In particular, there is no evidence that long-range base pairs are systematically overpredicted relative to short-range
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Die Effizienz von KapitalmärktenGPUs). In our solution, we use the Carrillo-Lipman upper and lower bounds to reduce the amount of computation. We propose a fine-grained strategy to explore the search space by using 2D projections. The results were obtained with a GTX 580 NVidia GPU comparing sets of 3 sequences (real and synthetic
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https://doi.org/10.1007/978-3-322-92426-1ntly, we have introduced SETTER — a fast and accurate method for RNA pairwise structural alignment. In the present contribution we describe its extension for multiple RNA structure alignment called MultiSETTER. It combines SETTER’s decomposition of RNA structures into disjoint fragments with a well
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