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Titlebook: Structural Bioinformatics; Methods and Protocol Zoltán Gáspári Book 2020 Springer Science+Business Media, LLC, part of Springer Nature 2020

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Protein Thermal Stability Engineering Using HoTMuSiC,physiological conditions. We set up a HoTMuSiC-based pipeline, which uses additional information to avoid mutations of functionally important residues, identified as being too well conserved among homologous proteins or too close to annotated functional sites. The efficiency of this pipeline is succ
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A Comprehensive Computational Platform to Guide Drug Development Using Graph-Based Signature MethodM-lig, Arpeggio, pkCSM). Incorporating these tools along the drug development process can help ensure that candidate leads are chemically and biologically feasible to become successful and tractable drugs.
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,Protein–Protein Modeling Using Cryo-EM Restraints,igid fitting of the individual components into the EM density map. While this would appear an obvious option, they ignore key aspects of molecular recognition, the energetics and flexibility of the interfaces. Moreover, this often restricts the modeling to a unique source of data, the EM density map
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Biological Assembly Comparison with VAST+,be more readily detected and observed. The method is easily extended to include RNA or DNA molecules. VAST+ results may be accessed via the URL ., then entering a PDB accession or terms in the search box, and using the link [VAST+] in the upper right corner of the Structure Summary page.
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