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Titlebook: Single Nucleotide Polymorphisms; Methods and Protocol Pui-Yan Kwok Book 20031st edition Springer Science+Business Media New York 2003

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发表于 2025-3-21 19:07:24 | 显示全部楼层 |阅读模式
书目名称Single Nucleotide Polymorphisms
副标题Methods and Protocol
编辑Pui-Yan Kwok
视频video
丛书名称Methods in Molecular Biology
图书封面Titlebook: Single Nucleotide Polymorphisms; Methods and Protocol Pui-Yan Kwok Book 20031st edition Springer Science+Business Media New York 2003
描述Single nucleotide polymorphisms (SNPs) have become the markers of choice in elucidating the relationship between DNA sequence variation and susceptibility to disease and have clearly become the focus of the next phase of the human genome project. In Single Nucleotide Polymorphisms: Methods and Protocols, Pui-Yan Kwok, MD, PhD, has assembled a collection of robust techniques for the difficult process of SNP discovery and genotyping. These cutting-edge protocols for mutation/SNP detection utilize denaturing high-performance liquid chromatography (dHPLC), single-strand conformation polymorphism (SSCP), conformation-sensitive gel electrophoresis (CSGE), chemical cleavage, and direct sequencing. Equally powerful and up-to-date methods are given for genotyping SNPs, including molecular beacons, the Taqman assay, single-base extension approaches, pyrosequencing, ligation, the Invader assay, and primer extension with mass spectrometry detection. Described in step-by-step detail by their inventors, each method provides extensive notes on the technical steps critical for experimental success, time-saving techniques, and tips on avoiding pitfalls. .Comprehensive and authoritative, Single Nucl
出版日期Book 20031st edition
版次1
doihttps://doi.org/10.1385/1592593275
isbn_ebook978-1-59259-327-9Series ISSN 1064-3745 Series E-ISSN 1940-6029
issn_series 1064-3745
copyrightSpringer Science+Business Media New York 2003
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发表于 2025-3-21 22:59:08 | 显示全部楼层
Book 20031st editionlity to disease and have clearly become the focus of the next phase of the human genome project. In Single Nucleotide Polymorphisms: Methods and Protocols, Pui-Yan Kwok, MD, PhD, has assembled a collection of robust techniques for the difficult process of SNP discovery and genotyping. These cutting-
发表于 2025-3-22 02:21:08 | 显示全部楼层
SNP Detection and Allele Frequency Determination by SSCP,essary to sequence the STSs in individuals with different genotypes. However, once an SNP sequence is correlated with the corresponding fragment mobility in an SSCP analysis, sequencing may not be necessary for genotyping, because SSCP electrophoresis is highly reproducible (.,.).
发表于 2025-3-22 06:16:44 | 显示全部楼层
SNP Discovery by Direct DNA Sequencing,cupy the same site. The uneven peak pattern makes it difficult sometimes to discern these composite peaks because one of the two polymorphic bases may be disproportionately smaller than the other base and the base-calling algorithm of the automatic DNA sequencer misses the correct call (.–.).
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SNPs: ,, With recent technologies for DNA sequencing and the detection of single-base differences, we are approaching the time when all differences in DNA sequence among individuals can be found. The next challenge is to relate these genetic differences to phenotypes such as disease risk and response to therapies.
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发表于 2025-3-22 23:41:26 | 显示全部楼层
Homogeneous Allele-Specific PCR in SNP Genotyping,NP) genotyping assay presented here combines AS PCR amplification with kinetic, realtime monitoring (.–.). It is robust, rapid, inexpensive, and allows accurate measurement of allele frequencies in pools of DNA, facilitating large-scale gene mapping.
发表于 2025-3-23 02:44:53 | 显示全部楼层
Oligonucleotide Ligation Assay,scribe two protocols for solid-phase detection of reaction products in the oligonucleotide ligation assay (OLA), although there are several other detection schemes in use. However, the general considerations of ligase-based sequence distinction are the same, and they will be described in some detail.
发表于 2025-3-23 09:35:45 | 显示全部楼层
Denaturing High-Performance Liquid Chromatography,e range of 48-67°C; they are retained less on the chromatographic separation matrix, allowing the separation of homo- and heteroduplex species by ion-pair reversed-phase HPLC (IP-RP-HPLC) (.). Characteristic peak patterns both for homozygous and heterozygous samples are obtained.
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