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Titlebook: Numerical Simulation in Molecular Dynamics; Numerics, Algorithms Michael Griebel,Gerhard Zumbusch,Stephan Knapek Textbook 2007 Springer-Ver

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发表于 2025-3-21 17:30:24 | 显示全部楼层 |阅读模式
书目名称Numerical Simulation in Molecular Dynamics
副标题Numerics, Algorithms
编辑Michael Griebel,Gerhard Zumbusch,Stephan Knapek
视频video
概述One of the first textbooks in the highly-relevant topic (material science, molecular modelling, drug design, nanotechnology).Includes supplementary material:
丛书名称Texts in Computational Science and Engineering
图书封面Titlebook: Numerical Simulation in Molecular Dynamics; Numerics, Algorithms Michael Griebel,Gerhard Zumbusch,Stephan Knapek Textbook 2007 Springer-Ver
描述.Particle models play an important role in many applications in physics, chemistry and biology. They can be studied on the computer with the help of molecular dynamics simulations. This book presents in detail both the necessary numerical methods and techniques (linked-cell method, SPME-method, tree codes, multipole technique) and the theoretical background and foundations. It illustrates the aspects modelling, discretization, algorithms and their parallel implementation with MPI on computer systems with distributed memory. Furthermore, detailed explanations are given to the different steps of numerical simulation, and code examples are provided. With the description of the algorithms and the presentation of the results of various simulations from the areas material science, nanotechnology, biochemistry and astrophysics, the reader of this book will be able to write his own programs for molecular dynamics step by step and to run successful experiments..
出版日期Textbook 2007
关键词algorithm; algorithms; computer; linear optimization; modeling; molecular dynamics; numerical methods; nume
版次1
doihttps://doi.org/10.1007/978-3-540-68095-6
isbn_softcover978-3-642-08776-9
isbn_ebook978-3-540-68095-6Series ISSN 1611-0994 Series E-ISSN 2197-179X
issn_series 1611-0994
copyrightSpringer-Verlag Berlin Heidelberg 2007
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发表于 2025-3-21 23:08:55 | 显示全部楼层
Numerical Simulation in Molecular Dynamics978-3-540-68095-6Series ISSN 1611-0994 Series E-ISSN 2197-179X
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发表于 2025-3-22 09:30:04 | 显示全部楼层
Michael Griebel,Gerhard Zumbusch,Stephan KnapekOne of the first textbooks in the highly-relevant topic (material science, molecular modelling, drug design, nanotechnology).Includes supplementary material:
发表于 2025-3-22 15:59:48 | 显示全部楼层
,From the Schrödinger Equation to Molecular Dynamics,n why it makes sense to apply the laws of classical mechanics, even though one should use the laws of quantum mechanics. Readers that are more interested in the algorithmic details or in the implementation of algorithms in molecular dynamics can skip this chapter.
发表于 2025-3-22 19:55:15 | 显示全部楼层
The Linked Cell Method for Short-Range Potentials,losest neighbors of each particle are considered. Note that the algorithm presented here also forms the basis for the methods discussed in the subsequent Chapters 7 and 8 for problems with long-range interactions.
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发表于 2025-3-23 03:52:48 | 显示全部楼层
Prospects,ve presented many specific applications of the molecular dynamics method from material sciences, biophysics, and astrophysics. Furthermore, we have given hints and details that will allow readers to implement the presented methods and algorithms on their own.
发表于 2025-3-23 07:03:38 | 显示全部楼层
Applications from Biochemistry and Biophysics,this book. Applications include the general dynamics of proteins and their conformations, the formation of membrane structures, the determination of inhibitor-ligand binding energies, and the study of the folding and unfolding of peptides, proteins, and nucleic acids.
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