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Titlebook: Hydrocarbon and Lipid Microbiology Protocols; Synthetic and System Terry J. McGenity,Kenneth N. Timmis,Balbina Nogale Book 2016 Springer-Ve

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发表于 2025-3-21 16:48:47 | 显示全部楼层 |阅读模式
书目名称Hydrocarbon and Lipid Microbiology Protocols
副标题Synthetic and System
编辑Terry J. McGenity,Kenneth N. Timmis,Balbina Nogale
视频videohttp://file.papertrans.cn/431/430330/430330.mp4
概述Offers readily-reproducible step-by-step laboratory methods.Provides helpful tips and tricks supporting the protocols.Includes troubleshooting advice.Contains practical laboratory guidance to promote
丛书名称Springer Protocols Handbooks
图书封面Titlebook: Hydrocarbon and Lipid Microbiology Protocols; Synthetic and System Terry J. McGenity,Kenneth N. Timmis,Balbina Nogale Book 2016 Springer-Ve
描述This Volume presents generic protocols for wet experimental and computer-based systems and synthetic biology approaches relevant to the field of hydrocarbon and lipid microbiology. It complements a second Volume that describes protocols for systems and synthetic biology applications. The wet experimental tools presented in this Volume include protocols for the standardisation of transcriptional measurements, application of uracil excision-based DNA editing for, inter alia, multi-gene assembly, the use of fluxomics to optimise “reducing power availability”, and the incorporation of non-canonical amino acids into proteins for optimisation of activities. Phenome-ing microbes, using a combination of RNA-seq and bioinformatic algorithms, is presented, as is an illustration, using methylotrophs as an example, of how the different key omics approaches constitute a pipeline for functional analysis, acquisition of a systems overview, and metabolic optimisation. Complementary computational tools that are presented include protocols for probing the genome architecture of regulatory networks, genome-scale metabolic reconstruction, and bioinformatic approaches to guide metabolic engineering. Th
出版日期Book 2016
关键词Environmental transcription factors; Expression systems; Fluxomics and metabolics; Higher-structure gen
版次1
doihttps://doi.org/10.1007/978-3-662-50432-1
isbn_softcover978-3-662-57058-6
isbn_ebook978-3-662-50432-1Series ISSN 1949-2448 Series E-ISSN 1949-2456
issn_series 1949-2448
copyrightSpringer-Verlag Berlin Heidelberg 2016
The information of publication is updating

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Protocol for the Standardisation of Transcriptional Measurements,One of the most important areas to standardise is the measurement of part, device and system activity in order to improve designs and aid sharing of data. While methods for standardising transcriptional measurements have been designed, they have suffered from poor uptake, and as more parts and syste
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Uracil Excision for Assembly of Complex Pathways,nd synthetic biology. Simplicity and robustness are attractive features met by the uracil excision DNA assembly method, which is one of the most inexpensive technologies available. Here, we describe four different protocols for uracil excision-based DNA editing: one for simple manipulations such as
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Phenome-ing Microbes,rganism’s isolate arise through simple sequence variations like single nucleotide polymorphisms (SNP) or small insertions/deletions (InDel). For some phenotypes, however, the underlying mechanism cannot be explained by simple genomic differences; rather, most of them are the result of more complex s
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A Practical Protocol for Integration of Transcriptomics Data into Genome-Scale Metabolic Reconstruc this huge volume of data is challenging from a purely mathematical and statistical point of view, and integrative approaches are becoming a necessity. Genome-scale metabolic models offer an unprecedented chance to integrate and contextualise, in the correct biological context, this large amount of
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