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Titlebook: Distributed and Sequential Algorithms for Bioinformatics; Kayhan Erciyes Textbook 2015 Springer International Publishing Switzerland 2015

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Intergovernmental Agencies Related to the UN regard to biological networks. An algorithm is a set of instructions to solve a given problem. We introduce basic algorithmic concepts and methods such as greedy and divide and conquer strategies with emphasis on the commonly used approaches of dynamic programming and graph algorithms in bioinforma
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https://doi.org/10.1057/9780230270336ch for a pattern in a longer text of symbols. Approximate string matching allows a given number of mismatches of the pattern in the text. We will see there are polynomial time algorithms for both cases. However, the sizes of DNA nucleotide and protein amino acid sequences being large necessitate the
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https://doi.org/10.1057/9780230270336 sequence analysis tasks to quantify the similarities between the sequences. The goal of sequence alignment is to transform one sequence to another with minimum number of modifications. It can be performed in polynomial time between two sequences but heuristics are commonly used to compare multiple
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https://doi.org/10.1057/9780230270336 it, and these structures are considered as the building blocks of biological networks. Discovery of such motifs is important as it gives insight to the functioning of a network and also provides an alternative means to compare and analyze two or more biological networks. If two networks have common
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