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Titlebook: DNA Repair; Methods and Protocol Lata Balakrishnan,Jason A. Stewart Book 2019 Springer Science+Business Media, LLC, part of Springer Nature

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发表于 2025-3-21 19:55:35 | 显示全部楼层 |阅读模式
书目名称DNA Repair
副标题Methods and Protocol
编辑Lata Balakrishnan,Jason A. Stewart
视频video
概述Includes cutting-edge methods and protocols.Provides step-by-step detail essential for reproducible results.Contains key notes and implementation advice from the experts
丛书名称Methods in Molecular Biology
图书封面Titlebook: DNA Repair; Methods and Protocol Lata Balakrishnan,Jason A. Stewart Book 2019 Springer Science+Business Media, LLC, part of Springer Nature
描述.The volume outlines techniques used to study the primary mechanisms of important DNA repair pathways. The chapters in this book are organized into five sections, each discussing a specific aspect of repair biology. Part I reviews the role of post-translational modifications of HDR, and DNA damage caused by defective telomere replication. Part II describes methods to detect and measure DNA breaks and proteins involved in DNA damage response. Part III talks about methods designed to measure DNA repair efficiency and characterize factors involved in the repair process. Part IV discusses various in vitro assays used to purify recombinant proteins that are used to study DNA repair enzyme mechanisms. Lastly, Part V focuses on methods to study the damage arising during DNA replication. Written in the highly successful .Methods in Molecular Biology. series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls..Cutting-edge and authoritative, .DNA Repair: Methods and Protocols. is an essential resource for novice and ex
出版日期Book 2019
关键词CRISPR; Laser microradiation; Xenopus; nucleosomal templates; ATPase assays
版次1
doihttps://doi.org/10.1007/978-1-4939-9500-4
isbn_softcover978-1-4939-9502-8
isbn_ebook978-1-4939-9500-4Series ISSN 1064-3745 Series E-ISSN 1940-6029
issn_series 1064-3745
copyrightSpringer Science+Business Media, LLC, part of Springer Nature 2019
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Resolving Roadblocks to Telomere Replicationon. The terminal position, repetitive sequence, and structural complexities of the telomeric DNA make the telomere an inherently difficult region to replicate within the genome. Thus, despite functioning to protect genome stability mammalian telomeres are also a source of replication stress and have
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Methods to Study Trinucleotide Repeat Instability Induced by DNA Damage and Repaired by DNA replication, repair, recombination, and gene transcription. Somatic TNR instability is involved in the progression of TNR expansion diseases and can be modulated by DNA damage repair and gene transcription. Recent studies from our group and others have shown that DNA base damage and its re
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Extracting and Measuring dNTP Pools in ility. Ribonucleotide reductase (RNR) catalyzes the rate-limiting step in dNTP synthesis and altered regulation of RNR leads to imbalanced dNTP pools. Increased dNTP levels are mutagenic and have the potential to interfere with pathways that are involved in DNA replication, repair and DNA damage con
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Conversion Tract Analysis of Homology-Directed Genome Editing Using Oligonucleotide Donorsnversion tract is defined as the amount of genetic information that is converted from the homology donor to a given strand of the targeted chromosomal locus. Because of this, conversion tract analysis retrospectively not only elucidates the mechanism of homology-directed genome editing but also prov
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Reporter Assays for BER Pathwayamages induced by free radicals and ionizing radiation. Deregulation or deficiencies in BER mechanisms increase the level of mutations leading to carcinogenesis, and single-strand DNA break formation, which may be converted to double-strand breaks and induce apoptosis. BER deficiency is associated w
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Methods for Studying DNA Single-Strand Break Repair and Signaling in , Egg ExtractsUnrepaired SSBs compromise DNA replication and transcription programs, leading to genome instability, and have been implicated in many diseases including cancer. In this chapter, we introduce methods to study the ATR-Chk1 DNA damage response (DDR) pathway and DNA repair pathway in response to a site
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Chromatin Immunoprecipitation (ChIP) of Plasmid-Bound Proteins in , Egg Extractsitation (ChIP) to detect the interaction of proteins with plasmid DNA incubated in extract. The combination of ChIP and . egg extracts provides a highly versatile and tractable approach to analyze dynamic protein–DNA interactions with great spatial and temporal detail.
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