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Titlebook: DNA Computing; 11th International W Alessandra Carbone,Niles A. Pierce Conference proceedings 2006 Springer-Verlag Berlin Heidelberg 2006 D

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Expectation and Variance of Self-assembled Graph Structures, in some static conditions be used to predict the outcome of a graph self-assembly. Using probabilistic methods, we show the expectation and the variance of the number of self-assembled cycles, . ., and discuss generalization of these results for . .. We tie this analysis to previously observed experimental results.
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Hairpin Structures in DNA Words,es, as well as hairpin-free ones. We study their algebraic properties and their computational complexity. Related polynomial-time algorithms deciding hairpin-freedom of regular sets are presented. Finally, effective methods for design of long hairpin-free DNA words are given.
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Efficient Algorithm for Testing Structure Freeness of Finite Set of Biomolecular Sequences, .(. .) time. Then, we will give an evaluation method for sequence design system, which requires .(. .) time for precomputation, and .(. .) time and .(. .) space for each evaluation of sequence sets. The authors believe that this result will give an important progress of efficient sequence design systems.
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Linearizer and Doubler : Two Mappings to Unify Molecular Computing Models Based on DNA Complementarguages and of Watson-Crick languages, which leads to not only a unified view of the two families of languages but also a clarified view of the computational capability of the DNA complementarity. One of the results implies that any recursively enumerable language can be expressed as the projective image of . .(.) for a minimal linear language ..
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Fourierreihe, Fourier-Transformationration algorithm we propose was tested by a lab experiment here described, since the presence of few sequences is enough for checking the completeness of the library. The simple technology of this approach is interesting in and of itself, and it can have many useful applications in biological contexts.
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