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Titlebook: DNA Computing; 10th International W Claudio Ferretti,Giancarlo Mauri,Claudio Zandron Conference proceedings 2005 Springer-Verlag Berlin Hei

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Hans-Dieter Lippert,Bernd-Rüdiger Kerne of the Hamming similarity. Then we consider various construction methods for Hamming bond-free languages, including the recently introduced method of templates, and obtain a complete structural characterization of all maximal Hamming bond-free languages. This result is applicable to the .-.-code property introduced by Jonoska and Mahalingam.
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https://doi.org/10.1007/978-3-642-78388-3ows us among others to construct (i) a uniform algorithm deciding in polynomial time whether a given DNA language possesses any of the studied properties, and (ii) in many cases also an algorithm deciding whether a given DNA language is maximal with respect to the desired property.
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Computing by Observing Bio-systems: The Case of Sticker Systems,dering sticker systems in the standard manner. Even regular simple sticker systems (whose generative power is subregular) become universal when considered in this new framework. The significance of these results for DNA computing (by sticker systems) is briefly discussed.
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Parallelism in Gene Assembly,rallel a micronuclear gene. We believe that the study of parallelism contributes to a better understanding of the nature of gene assembly, and in particular it provides a new insight in the complexity of this process.
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Bond-Free Languages: Formalizations, Maximality and Construction Methods,e of the Hamming similarity. Then we consider various construction methods for Hamming bond-free languages, including the recently introduced method of templates, and obtain a complete structural characterization of all maximal Hamming bond-free languages. This result is applicable to the .-.-code property introduced by Jonoska and Mahalingam.
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Preventing Undesirable Bonds Between DNA Codewords,ows us among others to construct (i) a uniform algorithm deciding in polynomial time whether a given DNA language possesses any of the studied properties, and (ii) in many cases also an algorithm deciding whether a given DNA language is maximal with respect to the desired property.
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Minimum Basin Algorithm: An Effective Analysis Technique for DNA Energy Landscapes,tra’s and Jarník-Prim’s algorithms, we generate the shape of the basin from its formation process. The resulting basin contains the true energy barrier. Furthermore, a comparison between the basin feature and the corresponding actual chemical reaction shows that the basin can be used as a criterion to explain the reaction.
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Ausblick und künftige Problemfelderparticular, given a function, we study the time required to determine its value for a given input. In the simplest instance, the analysis has interesting connections with interacting particle systems and variational problems.
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