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Titlebook: Computer Simulations of Aggregation of Proteins and Peptides; Mai Suan Li,Andrzej Kloczkowski,Maksim Kouza Book 2022 Springer Science+Busi

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Molecular Dynamics Simulations of Protein Aggregation: Protocols for Simulation Setup and Analysis tting up, running, and analyzing MD simulations of aggregating peptides using GROMACS. For the analysis, we provide the scripts that were developed in our lab, which allow to determine the oligomer size and inter-peptide contacts that drive the aggregation process. Moreover, we explain and provide t
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1064-3745 oting and avoiding known pitfalls... ..Authoritative and cutting-edge, .Computer Simulations of Aggregation of Proteins and Peptides .aims to ensure successful results in the further study of this vital field..978-1-0716-1548-5978-1-0716-1546-1Series ISSN 1064-3745 Series E-ISSN 1940-6029
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Book 2022ship between protein misfolding and protein aggregation, methods of prediction of aggregation propensities of protein, peptides, protein structure, results of computer simulations of aggregation, and computational simulations focused on specific diseases such as Alzheimer’s, Parkinson’s, and preecla
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Advances in Environmental Microbiology. We present the case studies of the three therapeutic proteins, including antibodies, exploring the practical use of the A3D standalone tool. The case studies demonstrate that protein solubility can be easily improved by the A3D prediction of non-destabilizing amino acid mutations at the protein surfaces.
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