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Titlebook: Comparative Genomics; Methods and Protocol João C. Setubal,Jens Stoye,Peter F. Stadler Book 2018 Springer Science+Business Media LLC 2018 O

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发表于 2025-3-21 18:43:20 | 显示全部楼层 |阅读模式
书目名称Comparative Genomics
副标题Methods and Protocol
编辑João C. Setubal,Jens Stoye,Peter F. Stadler
视频video
概述Includes cutting-edge methods and protocols.Provides step-by-step detail essential for reproducible results.Contains key notes and implementation advice from the experts
丛书名称Methods in Molecular Biology
图书封面Titlebook: Comparative Genomics; Methods and Protocol João C. Setubal,Jens Stoye,Peter F. Stadler Book 2018 Springer Science+Business Media LLC 2018 O
描述.This volume provides broad coverage of computational and mathematical techniques and concepts related to the field of comparative genomics. The topics covered in the chapters range from those concerned with general techniques and concepts that apply to all organisms to others that are more specialized, covering specific biological systems such as viruses, .Drosophila., and .Homo sapiens.. Written in the highly successful .Methods in Molecular Biology. series format, by authors who are active researchers in the field, many chapters include step-by-step procedures, which illustrate practical applications of the techniques described..Cutting-edge and thorough, .Comparative Genomics: Methods and Protocols. should be useful to students and researchers in the continually growing and exciting field of comparative genomics..
出版日期Book 2018
关键词Ortholog; accessory genomes; eukaryotes; miRNA genes; phylogenomics; drosophila; bioinformatics; computatio
版次1
doihttps://doi.org/10.1007/978-1-4939-7463-4
isbn_softcover978-1-4939-8493-0
isbn_ebook978-1-4939-7463-4Series ISSN 1064-3745 Series E-ISSN 1940-6029
issn_series 1064-3745
copyrightSpringer Science+Business Media LLC 2018
The information of publication is updating

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Comparative Genomics for Prokaryotes,s of these genomes have been sequenced. In prokaryotes, gene architecture lacks the intron-exon structure of eukaryotic genes (with an occasional exception). These two facts mean that there is an abundance of data for prokaryotic genomes, and that they are easier to study than the more complex eukar
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Assembly, Annotation, and Comparative Genomics in PATRIC, the All Bacterial Bioinformatics Resourceprograms and pipelines exist, but acquiring the expertise to run them, and then understanding the output can be a challenge..The Pathosystems Resource Integration Center (PATRIC, .) has created an end-to-end analysis platform that allows researchers to take their raw reads, assemble a genome, annota
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Phylogenomics,dance of genomic data for an enormous variety of organisms has enabled phylogenomic inference of many groups, and this has motivated the development of many computer programs implementing the associated methods. This chapter surveys phylogenetic concepts and methods aimed at both gene tree and speci
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A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes,d. MGEs include transposons (Tn), insertion sequences (ISs), prophages, genomic islands (GEIs), integrons, and integrative and conjugative elements (ICEs). They are intimately involved in genome evolution and promote phenomena such as genomic expansion and rearrangement, emergence of virulence and p
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Comparative Metagenomics,inue to be generated, covering a huge variety of environmental niches, including several different human body sites. Comparing these metagenomes and identifying their commonalities and differences is a challenging task, due not only to the large amounts of data, but also because there are several me
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Family-Free Genome Comparison,ations. In this chapter, we review the family-free genome comparison tool . which provides several methods for gene order analyses that do not require prior knowledge of evolutionary relationships between the genes across the studied genomes. Moreover, the tool features a complete workflow for genom
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