Titlebook: Biomolecular Simulations; Methods and Protocol Luca Monticelli,Emppu Salonen Book 2013 Springer Science+Business Media New York 2013 Coarse

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Fatma Alibaz-Oner,Haner Direskeneli particle-method particle-method Ewald algorithms, multigrid, fast multipole, and local methods. We also highlight some recent developments targeting more accurate, yet classical, representation of the molecular charge distribution.

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Force Fields for Classical Molecular Dynamics introduce the problem of the calculation of nonbonded interactions, of particular importance for charged macromolecules. Different parameterization philosophies are then presented, followed by a section on force field validation. We conclude with a brief overview on future perspectives for the development of classical force fields.

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