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Titlebook: Algorithms in Bioinformatics; 9th International Wo Steven L. Salzberg,Tandy Warnow Conference proceedings 2009 Springer-Verlag Berlin Heide

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Dorothée Kohler,Jean-Daniel Weiszof pieces of multiple other segmental duplications. This complex genomic organization complicates analysis of the evolutionary history of these sequences. Earlier, we introduced a genomic distance, called duplication distance, that computes the most parsimonious way to build a target string by repea
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https://doi.org/10.1007/978-3-476-03304-8n. However, many sources of external information are still being omitted from consideration. Here, we investigate the use of product lengths from RT-PCR experiments in gene finding. We present hardness results and practical algorithms for several variants of the problem and apply our methods to a re
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