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Titlebook: Algorithms for Computational Biology; First International Adrian-Horia Dediu,Carlos Martín-Vide,Bianca Truth Conference proceedings 2014 S

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https://doi.org/10.1007/978-3-319-07953-0algorithms; bioinformatics; combinatorics; computational biology; computational complexity; discrete math
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https://doi.org/10.1007/978-3-662-06547-1The gene expression data .. is given for various time points and the matrix . of interactions among the genes is unknown. First we formulate and solve a parameter estimation problem by linear programming in order to obtain the entries of the matrix .. We then use ideas from Vester’s ., more precisel
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https://doi.org/10.1007/978-3-662-06547-1er. In this work, we deal with inversion events, which occur when a segment of DNA sequence in the genome is reversed. In our model, each inversion costs the number of elements in the reversed segment. We present a new heuristic for this problem and we show that our method outperforms a previous app
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Die Regulation der Nitritreduktase,cally, and algorithmic work in this area has been neglected. Here, we address this topic and formulate three constrained optimization problems for block-based trimming, i.e., truncating the same low-quality positions at both ends for all reads and removing low-quality truncated reads. We find that t
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