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Titlebook: String Processing and Information Retrieval; 17th International S Edgar Chavez,Stefano Lonardi Conference proceedings 2010 Springer Berlin

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Counting and Verifying Maximal Palindromesin the output size, for alphabets of size at most 3. These results follow from a close relationship between maximal palindromes and parameterized matching. Secondly, we present a linear time algorithm which finds a string . such that .(.) is identical to a given set of maximal palindromes.
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Improved Fast Similarity Search in Dictionariesn and preprocessing time significantly. At the same time, running times of queries are virtually unaffected. We are able to match in lists of hundreds of thousands of words and beyond within microseconds for reasonable distances.
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On Tag Spell Checkings Flickr and YouTube. We show the effectiveness of our approach on the basis of an experimentation done on real-world data. We show a precision of up to 93% with a recall (i.e., the number of errors detected) of up to 100%.
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On the Hardness of Counting and Sampling Center Strings. We show . is impossible to solve exactly or even approximately in polynomial time, and that restricting . so that any one of the parameters ., ℓ, or . is fixed leads to an FPRAS. We show equivalent results for the problem of efficiently sampling center strings uniformly at random.
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Identifying SNPs without a Reference Genome by Comparing Raw Readsntial of our method on real data. The method is tailored to short reads (typically Illumina), and works well even when the coverage is low where it reports few but highly confident SNPs. Our program, called ., can be downloaded here: ..
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Conference proceedings 2010s, Mexico, in October 2010..The 26 long and 13 short papers presented were carefully reviewed and selected from 109 submissions. The volume also contains 2 invited talks. The papers are structured in topical sections on crowdsourcing and recommendation; indexes and compressed indexes; theory; string
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