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Titlebook: Epigenetics Protocols; Trygve O. Tollefsbol Book 2004 Humana Press 2004

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Profiling DNA Methylation by Bisulfite Genomic Sequencing,atus of the cytosines in the genome. Bisulfite genomic sequencing is the most attractive choice so far for many laboratories. Various protocols have been established, but difficulties are often encountered, particularly by individuals who have limited experience in this field. This analysis presents
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Methylation-Sensitive Single-Strand Conformation Analysis,lfite to convert unmethylated cytosine to uracil, even as methylated cytosine remains unchanged, constitutes the basis for differentiating between methylated and unmethylated specific CpG sites in CpG islands. This technique therefore is critical to the success of this approach. Different parameters
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SIRPH Analysis,pG sites. The first step DNA sample to be studied is treated with sodium bisulfite, which converts selectively unmethylated cytosines to uracil, while methylated cytosines remain unconverted. Subsequently, a SNuPE reaction is performed, with an oligo just flanking a CpG site, using a purified polyme
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Methylation-Specific Oligonucleotide Microarray,pG sites. Based on the bisulfite modification of DNA that converts unmethylated cytosines to uracil but leaves the 5′methylcytosine intact, the method utilizes short oligonucleotides corresponding to the methylated and unmethylated alleles as probes affixed on solid support and products amplified fr
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Trygve O. TollefsbolIncludes supplementary material:
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