Titlebook: Computational Advances in Bio and Medical Sciences; 10th International C Sumit Kumar Jha,Ion Măndoiu,Alex Zelikovsky Conference proceedings

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https://doi.org/10.1007/978-1-4020-8733-2erties, including Tier 1 genomes from the BioCyc collection of organismal Pathway/Genome Databases and low complexity microbial communities. Resulting performance metrics equaled or exceeded other prediction methods on organismal genomes with improved precision on multi-organismal datasets.

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https://doi.org/10.1007/978-1-4020-8733-2node of the phylogeny. These strategies result in substantially more complete reconstructions than existing methods. We deploy a number of quality measures: contig lengths, continuity of contig structure on successive ancestors, coverage of the reconstruction on the input genomes, and rearrangement

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https://doi.org/10.1007/978-1-4020-8743-1test sequence alignment methods) while maintaining high performance with a 0.99 precision and a 0.99 recall. MetaMLP can process 100 million reads in around 10 min in a laptop computer, a 50x speed up compared to Diamond. MetaMLP is freely available at ..

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MetaProb 2: Improving Unsupervised Metagenomic Binning with Efficient Reads Assembly Using Minimizer effectiveness of MetaProb 2 is demonstrated in both simulated and synthetic datasets in comparison with state-of-art binning tools such as MetaProb, AbundanceBin, Bimeta and MetaCluster..Available at: ..

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Computational Study of Action Potential Generation in Urethral Smooth Muscle Cellthe internal kinetics are expressed in terms of the ordinary differential equations. This computational model generates experimental spontaneous action potential and the underlying ionic currents in urethral smooth muscle cell successfully. In summary, this mathematical model contributes an elementa

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