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Titlebook: Algorithms in Bioinformatics; 15th International W Mihai Pop,Hélène Touzet Conference proceedings 2015 Springer-Verlag Berlin Heidelberg 20

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期刊全称Algorithms in Bioinformatics
期刊简称15th International W
影响因子2023Mihai Pop,Hélène Touzet
视频video
发行地址Includes supplementary material:
学科分类Lecture Notes in Computer Science
图书封面Titlebook: Algorithms in Bioinformatics; 15th International W Mihai Pop,Hélène Touzet Conference proceedings 2015 Springer-Verlag Berlin Heidelberg 20
影响因子This book constitutes the refereed proceedings of the 15th International Workshop on Algorithms in Bioinformatics, WABI 2015, held in Atlanta, GA, USA, in September 2015. The 23 full papers presented were carefully reviewed and selected from 56 submissions. The selected papers cover a wide range of topics from networks to phylogenetic studies, sequence and genome analysis, comparative genomics, and RNA structure.
Pindex Conference proceedings 2015
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A Sub-quadratic Time and Space Complexity Solution for the Dated Tree Reconciliation Problem for Seonary trees. Our theoretical results are then validated using a combination of synthetic and biological data with our proposed model shown to save almost . space while finishing in half the time compared to existing methodologies.
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Maximum Parsimony Analysis of Gene Copy Number Changes,or large datasets. In this paper we design a new algorithm for the RSMT problem, based on Maximum Parsimony phylogeny inference. Experimental results from both simulated and real tumor data show that our approach outperforms previous heuristics for the RSMT problem, thus obtaining better models for
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Multiple-Ancestor Localization for Recently Admixed Individuals,tions integrated into a two-layered Hidden Markov Model, designed to capture both long-range correlations between SNPs due to the recent mixing and short-range correlations due to linkage disequilibrium. We evaluate the method on both simulated and real European data, and demonstrate that it achieve
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Sparse RNA Folding Revisited: Space-Efficient Minimum Free Energy Prediction,s. Then, we present the time- and space-efficient sparsified free energy minimization algorithm ., which guarantees optimal structure prediction. In particular, this novel algorithm provides efficient fold reconstruction based on dynamically garbage collected trace arrows. We provide theoretical and
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https://doi.org/10.1007/978-3-658-05889-0onstant, symmetric and plaid biclustering models. Second, we propose a solution to discover these flexible modules without time and memory bottlenecks by seizing high efficiency gains from the inherent structural sparsity of networks. Results from the analysis of protein and gene interaction network
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