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Titlebook: Algorithms in Bioinformatics; Third International Gary Benson,Roderic D. M. Page Conference proceedings 2003 Springer-Verlag Berlin Heidel

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Die Reflexgesetze der Nahrungsrhythmik,l chaining algorithm can be used in a variety of problems in comparative genomics: The identification of regions of similarity (candidate regions of conserved synteny), the detection of genome rearrangements such as transpositions and inversions, and exon prediction.
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Gabriele Köhler,Georg Knauss,Peter Zedlerto the evaluation of phylogenetic tree and supertree construction methods using biologically curated data..We also relate one of the sampling problems to the well-known clique problem on undirected graphs. From this, we obtain an interesting new class of graphs for which many open problems exist.
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New Algorithm for the Simplified Partial Digest Problemlgorithm. An extensive computational experiment proved a clear superiority of the presented algorithm over other existing approaches. In addition, a thorough analysis of the Simplified Partial Digest Problem and a discussion of common experimental errors are given.
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Efficient Generation of Uniform Samples from Phylogenetic Treesto the evaluation of phylogenetic tree and supertree construction methods using biologically curated data..We also relate one of the sampling problems to the well-known clique problem on undirected graphs. From this, we obtain an interesting new class of graphs for which many open problems exist.
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A Linear-Time Majority Tree Algorithmve visualization system for exploring distributions of trees, where speed is a serious concern for real-time interaction. The linear running time is achieved by using succinct representation of the subtrees and efficient methods for the final tree reconstruction.
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New Efficient Algorithm for Detection of Horizontal Gene Transfer Eventsility of horizontal gene transfers between any couple of branches of the species tree. In the application section we show how the introduced method can be used to predict eventual transfers of the rubisco . gene in the molecular phylogeny including plastids, cyanobacteria, and proteobacteria.
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