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Titlebook: Algorithmic Bioprocesses; Anne Condon,David Harel,Erik Winfree Book 2009 Springer-Verlag Berlin Heidelberg 2009 Algorithmic bioprocesses.A

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Fang Qi,Xing Chang,Zhe Tang,Wenbo Wangore appropriate for the discrimination tasks. A few kernel functions that extend the string kernel to measure the similarity of two RNA sequences from the viewpoint of secondary structures have been proposed. In this article, we give an overview of recent progress in SCFG-based methods for RNA seque
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Examples 6.1 and 6.2: 2-out-of-4 (2,4),ct to the number of tiles given to the system. We will show that this equilibria analysis can be transformed into a convex programming problem with a set of variables of size polynomial with respect to the number of input tiles.
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Dependability in Medicine and Neurologyoperty of residue conservation. We introduce the concept of “evolutionary content” of a tree of sequences, and demonstrate at what extent the more classical notion of “information content” on sequences approximates the new measure and in what manner tree topology contributes sharper information for the detection of protein binding sites.
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Dependability of Engineering Systemsficantly, it has recently been experimentally established that gene rearrangement in the stichotrichous ciliate . (.) proceeds in a template-guided fashion. This survey describes recent work on TGR as a biological process and the computational properties of the formal model of TGR.
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Stochastic Processes and Models,on. A decade ago, we presented our experience in this area in the hope that we could help investigators to anticipate experimental problems that affect DNA computing schemes. Here, we review these points from the vantage point of further experience, indicating both modifications to the original criteria and new points as well.
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