聚集
发表于 2025-3-28 17:14:49
Key Element: Si / Schlüsselelement: Si regions, and non-coding non-regulatory DNA exhibit different statistical patterns. We suggest capturing and measuring these patterns by the following suite of statistical tools: (1) the ‘fluffy-tail’ test, a bootstrap procedure to recognize statistically significant abundant similar words in regula
坚毅
发表于 2025-3-28 20:51:26
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Leisureliness
发表于 2025-3-29 02:14:11
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除草剂
发表于 2025-3-29 04:38:31
Recognition of Coding Regions in Genome AlignmentLRs, i.e., sequences of consecutive high-scoring windows. Presumably, each QELR contains one exon. Third, we point out an exon within every QELR. All the steps have to be performed twice, for the direct and reverse complement chains independently. Finally, we compare the predictions for two chains t
myocardium
发表于 2025-3-29 08:01:51
Transcription Regulatory Regions Database (TRRD): A Source of Experimentally Confirmed Data on Trans(10 045) are collected in TRRD. Of them, 37 % of regulatory units and 38 % of binding sites are related to human genes. This paper characterizes groups of experiments basing on which regulatory units and binding sites are annotated. Examples of TRRD entries are given. The database is available at ht
Orgasm
发表于 2025-3-29 14:28:53
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GLOOM
发表于 2025-3-29 18:34:41
VMM: A Variable Memory Markov Model Prediction of Nucleosome Formation Siteskov model) computes the nucleosome formation potential for genomic DNA sequences of arbitrary lengths, including the short transcription factor binding sites. The VMM is publicly available at <http://wwwmgs.bionet.nsc.ru/programs/VMM/>.
钳子
发表于 2025-3-29 22:12:47
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shrill
发表于 2025-3-30 02:33:14
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加强防卫
发表于 2025-3-30 05:30:41
New Methods to Infer DNA Function from Sequence Informationze of the sliding window and hence avoids averaging. The application of our methods to several annotated data sets from six eukaryotic species enables a clear separation of coding, regulatory, and non-coding non-regulatory DNA. We propose that established computational methods complemented by our ne