Banquet 发表于 2025-3-26 23:01:11
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Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory Element identify all known cell-cycle related TFBMs among its top ranking motifs. Our method can also be directly applied to discriminative motif finding. By utilizing the ChIP-chip data of Lee ., we predicted potential binding motifs of 113 known transcription factors of budding yeast.先驱 发表于 2025-3-27 14:17:25
Improved Duplication Models for Proteome Network Evolution, these models, for . > 1, are very different from that of the yeast proteome network. We address this problem by introducing a new network growth model that takes into account the sequence similarity between pairs of proteins (as a binary relationship) as well as their interactions. The new model ca轻触 发表于 2025-3-27 20:55:47
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Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences,wing two-stage strategy that extends the solvable values of . substantially for the pattern-driven approach: first use an .(2..) algorithm to exhaustively search over all candidate motifs allowing arbitrary don’t care positions but disallowing mismatches, then refine these motifs by allowing a limitApogee 发表于 2025-3-28 03:47:29
An Interaction-Dependent Model for Transcription Factor Binding, majority of cases where the whole genome ChIP experiments have been performed. One possible reason for this is that the DNA binding of a particular transcription factor depends not only on its own motif, but also on synergistic or antagonistic action of neighboring motifs for other transcription fa出汗 发表于 2025-3-28 07:32:22
978-3-540-48293-2Springer-Verlag Berlin Heidelberg 2006painkillers 发表于 2025-3-28 10:59:59
Systems Biology and Regulatory Genomics978-3-540-48540-7Series ISSN 0302-9743 Series E-ISSN 1611-3349