使人烦燥
发表于 2025-3-23 12:18:04
Assessing the Potential of Gene Tree Parsimony for Microbial Phylogenomicscs..In this work, we (i) design and implement the first GTP based approach, ., for microbial phylogenomics, (ii) use an extensive simulation study to systematically assess the accuracies of PhyloGTP and two other recently developed methods, SpeciesRax and ASTRAL-Pro-2, under a range of different con
sinoatrial-node
发表于 2025-3-23 14:30:59
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Spartan
发表于 2025-3-23 18:49:06
On the Distribution of Synteny Blocks Under a Neutral Model of Genome Dynamicsement arising from horizontal gene transfer between evolving species along a phylogenetic tree. We focus on synteny blocks, that is, strings of genes conserved across genomes and derive analytic expressions for the expected number of synteny blocks of a given size (or of maximal size) in terms of th
Curmudgeon
发表于 2025-3-23 22:11:22
Sampling Gene Adjacencies and Geodesic Points of Random Genomesfy the set of all adjacencies of . with respect to . into four distinct groups. For two unichromosomal random genomes of the same gene-content, namely . and ., as the number of genes tends to infinity, we study the limiting behaviour of the frequencies of adjacencies of each type in . with respect t
Urgency
发表于 2025-3-24 02:58:21
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贸易
发表于 2025-3-24 09:17:35
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emission
发表于 2025-3-24 13:29:54
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Ancestor
发表于 2025-3-24 17:19:14
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peptic-ulcer
发表于 2025-3-24 19:15:43
https://doi.org/10.1007/978-981-15-2407-3ems: deciding whether one can add transfer edges to a tree to transform it into a galled PTN, and deciding whether a set of characters are galled-compatible, that is, they can be explained by some galled PTN.
打火石
发表于 2025-3-25 00:16:05
Lecture Notes in Networks and Systemsonary histories. We present a progressive supertree construction algorithm that relies on a dynamic programming approach to infer a transcript phylogeny based on precomputed clusters of orthologous transcripts. A phylogeny is constructed iteratively by performing pairwise supertree construction at e