补给线
发表于 2025-3-21 18:05:11
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运动性
发表于 2025-3-21 23:08:59
The parameterized complexity of sequence alignment and consensus, the problem, such as the number of sequences to be analyzed, the length of the common subsequence, and the size of the alphabet. Lower bounds on the complexity of this basic problem imply lower bounds on a number of other sequence alignment and consensus problems. At issue in the theory of paramete
多山
发表于 2025-3-22 00:51:49
Computing all suboptimal alignments in linear space,al directed acyclic graph (DAG) containing all suboptimal alignments. In this paper, we propose a method that computes such a DAG in space . to the graph size. Let . be the area of the region of the dynamicprogramming matrix bounded by the suboptimal alignments and . the maximum width of that region
G-spot
发表于 2025-3-22 06:19:21
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异端
发表于 2025-3-22 09:40:15
A context dependent method for comparing sequences,The scheme generalizes a widely used scoring scheme. A dynamic programming algorithm is developed to compute a largest-scoring alignment of two sequences of lengths . and . in .) time and .) space. Also developed is an algorithm for computing a largest-scoring local alignment between two sequences i
废墟
发表于 2025-3-22 16:35:27
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废墟
发表于 2025-3-22 19:35:02
,Alignment of trees — An alternative to tree edit,dered trees. The time complexity of this algorithm is .(¦..¦· s¦..· (deg(..) + deg(..)).), where ¦..¦ is the number of nodes in .. and deg(..) is the degree of .., .=1,2. The algorithm is faster than the best known algorithm for tree edit when deg(..) and deg(..) are smaller than the depths of .. an
消灭
发表于 2025-3-22 23:57:55
Parametric recomputing in alignment graphs, and gaps. Inappropriate choice of parameters causes irrelevant matches (“noise”) to be reported, thus obscuring biologically relevant matches. In practice, biologists frequently compare sequences in a few iterations, starting from a vague idea about appropriate parameters, then refining parameters
enchant
发表于 2025-3-23 04:03:23
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arsenal
发表于 2025-3-23 08:03:42
A text compression scheme that allows fast searching directly in the compressed file,ile directly. The scheme requires no modification of the string-matching algorithm, which is used as a black box; any string-matching procedure can be used. Instead, the . is modified; only the outcome of the matching of the modified pattern against the compressed file is decompressed. Since the com